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Download Center. Database, Data, Download Format. UniProtKB, UniProtKB/Swiss-Prot, xml UniMES, Metagenomic and Environmental Sequences, fasta  To look-up a protein sequence and find the database identifiers associated with it (i.e. database entries having the same sequence) you can  zcat | python uniprot2go.py GO:0070337 GO:0016021 > out.fasta extid, r.sequence) ) sys.stderr.write("Reported %s entries\n" % k) Of course, if you will run it multiple times, better download the dump and run it from local  UniProt is a freely accessible database of protein sequence and functional information, many Data format, Custom flat file, FASTA, GFF, RDF, XML. Download URL, www.uniprot.org/downloads & for downloading complete data sets  It is a high quality annotated and non-redundant protein sequence database, which brings together experimental results, Download - UniProt FTP sites.

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Click on “Create File” to generate and download “sequence.gb” and “sequence.fasta” files, respectively. N.B. The same can be done from the FASTA document 

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10 Apr 2018 In addition to the predefined FASTA, XML, RDF/XML and text formats, search results can also be downloaded in tab-separated or Excel format, 

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